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Gibbon is not using transactions yet, as Ross mentioned we've recently switched from MyISAM to InnoDB and transactions were not previously supported. There are limitations to transactions for parts of the system like running updates (transactions implicitly commit when making table alterations), but there are other areas of the system we hope to eventually add transactions to.
The Reports module as of v20 allows uploading PDF documents to a selected archive, which can be configured for parents and students to be able to access these. They'll become part of the overall reports archive, and you'll be able to track when they are read by parents. Check out the Upload Reports option.
Hope this helps!